All-in-all, I enjoyed it, but I definitely think there's flaws or short-comings in stuff like the repetitive crime design, the quantity of them needed for completion at the 2nd half, and the overall pace and way of escalation. From the story-side, poorly developed substories in Sable, etc, weird sense of timing ( progression of character arcs, how fast some things felt, where it lacked depth, etc ), and there are definitely parts of the story that imo - and the devs acknowledged this, that basically rely on the osmosis of "you know this about Spider-Man, so we don't need to even bother telling it" is not well done on some parts.
There's one particular character/plot development that I'd like to give praise to though.It's not uncommon - when crafting a villain's arc to lean back to the 'good in them' as an emotional conflict factor to make them believable, sympathetic to a degree & ups the ante. The game definitely did make use of this well with villains like Mr. Negative and Norman Osborne to great effect, where the crux of their lives are at stake - Harry for Norman, his family for Li and the diary of internal struggle, among other things. Cheesy, but it works.
But the choice to not use it with one particular villain, Doc Ock , even when it feels like it'd make sense to, instead makes the scene more powerful & rending. It's so easy to see how it could've been a Spider-Man 2 Movie situation, where upon the neuro-link being removed and Otto not realising ( hypthothetically ) that Spidey was Peter, they could've easily pulled for an emotional cheap shot where Otto was a guy who was just amplified of his evil by his machine and in the last moment, accept his defeat gracefully to Pete.
But nope. The fact that we got a reveal that Otto knew all along, the fact that the progression of the story path imo - paints Otto as someone who was more selfish in his agenda of building prosthetic ( for himself ) and how the seeds of Otto planning all the devious plans were already there immediately after Norman came and wreck shop - meant that the hopes that there was more of the "good Otto" than "Doc Ock" that Pete wished was dashed. And the fact that there was practically zero remorse and a genuine attempt to pin the blame on the neuro-tech plot device at the end when Otto tried to weasel his way out and blackmail Peter, meant that the scene was doubly heartbreaking for Peter.
It's one time where going 'full-evil' ( kind of ) worked in the story's favour.